hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K02A4.1
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Query:  K02A4.1  CE03457  locus:eca-39 twt1 like protein status:Confirmed SW:P54688 protein_id:CAA91805.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
aminotran_4     Aminotransferase class IV               538.8   3.9e-158   1
Cache           Cache domain                              5.1        5.3   2
Coprogen_oxidas Coproporphyrinogen III oxidase            2.3        1.8   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Cache             1/2      93   106 ..    80    93 .]    -0.6  2.1e+02
Coprogen_oxidas   1/1     164   175 ..   339   350 .]     2.3      1.8
aminotran_4       1/1      93   380 ..     1   309 []   538.8 3.9e-158
Cache             2/2     355   382 ..    66    93 .]     5.4      4.3

Alignments of top-scoring domains:
Cache: domain 1 of 2, from 93 to 106: score -0.6, E = 2.1e+02
                   *->HPnlrpvtkllkdw<-*
                      HP+ +p+++l++ +
     K02A4.1    93    HPKIEPIGELKIHP    106

Coprogen_oxidas: domain 1 of 1, from 164 to 175: score 2.3, E = 1.8
                   *->LlEvflkPRDWV<-*
                      L+E ++ +++WV
     K02A4.1   164    LTELLRLDQEWV    175

aminotran_4: domain 1 of 1, from 93 to 380: score 538.8, E = 3.9e-158
                   *->ngrivpyeelklhpsdhvlHYGdgvFEGikAYrgedggirlFrldeH
                      +++i p +elk+hp++ vlHY++++FEG+kAYrg d++ir+Fr++++
     K02A4.1    93    HPKIEPIGELKIHPGAKVLHYASELFEGMKAYRGIDNKIRMFRPEMN 139

                   ieRLyrSAkrlrlpiPfdkeellealreLvkkNqlwvPya.GaslYirpt
                   ++R+ r+A r +lp  fd+ee++++l+eL++++q+wvP+++++slY+rpt
     K02A4.1   140 MARMKRTALRAALPD-FDSEEMINVLTELLRLDQEWVPNSdVCSLYLRPT 188

                   rggtdrglgvktadlatvfviaspvgayykggqfepgvlaitsedvRaAw
                   ++gtd+ lgv +a++a++fvi++pvgayy++g f+p++l+++s+++R A+
     K02A4.1   189 LIGTDPTLGVGCATEAKMFVITGPVGAYYSTG-FQPVSLLADSRFIR-AF 236

                   pggtgdiKsGgNYlnsvLakqeAaekGyqqveaLlldengyitEvgtmNi
                   pgg+g++K+G+NY++++++++eAa+k++qqv++L++  n+  tEvgtmNi
     K02A4.1   237 PGGVGAYKMGCNYAPTIWVGKEAASKNCQQVLWLYGE-NEDLTEVGTMNI 285

                   FfvkngedGekelyTPpldqsGsILpGITRdsilelAkewGePEievkEr
                   F+++++e+G++el+TPpl++ G ILpG+TRds+lel +ewG  E++v+Er
     K02A4.1   286 FLFWKNEEGDMELITPPLHR-GLILPGVTRDSLLELGREWG--EYKVTER 332

                   pitleeLltAdEafrLlEvFgsGTAAevtPVkeIdgknetlhIgdgepGQ
                   ++++ee+++A+ + rL+E+FgsGTA++v+PV++I+++n
     K02A4.1   333 TLNMEEVKKALSEKRLYEMFGSGTACVVSPVGKILYHN------------ 370

                   vGpiTkkLqeelt<-*
                     ++T++ +eel+
     K02A4.1   371 --KVTDE-YEELH    380

Cache: domain 2 of 2, from 355 to 382: score 5.4, E = 4.3
                   *->GYaFivdnnGkvlaHPnlrpvtkllkdw<-*
                      G a +v++ Gk+l+H++    +++l+++
     K02A4.1   355    GTACVVSPVGKILYHNKVTDEYEELHIP    382

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