Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm3/seq/K02D10.1a
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: K02D10.1a CE17151 4-NITROPHENYLPHOSPHATASE status:Partially_confirmed SW:P34492 protein_id:AAK84537.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Hydrolase haloacid dehalogenase-like hydrolase 66.6 9.2e-17 1
DUF695 Family of unknown function (DUF695) 1.3 6.4 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF695 1/1 97 105 .. 237 245 .. 1.3 6.4
Hydrolase 1/1 15 259 .. 1 175 [. 66.6 9.2e-17
Alignments of top-scoring domains:
DUF695: domain 1 of 1, from 97 to 105: score 1.3, E = 6.4
*->AeqFSGEYv<-*
A++FSGEYv
K02D10.1a 97 ADKFSGEYV 105
Hydrolase: domain 1 of 1, from 15 to 259: score 66.6, E = 9.2e-17
*->ikavvFDkDGTLtdgk..eppiaeaivealaelgl...........a
+++++FD DG+L++g+ ++p e+i+ +l++ ++ +++++++
K02D10.1a 15 YDTFLFDADGVLWTGDipVPGAIEWINLLLEDPSKkvfvltnnstkT 61
pleevekllgrgl.g...erilleggltaell..................
+++++k+ g+++ ++ +++ + + a++l+++ ++ +++ +++
K02D10.1a 62 LEQYMKKIEKLGFgHlgrNNVISPAIVLADYLksnadkfsgeyvyligte 111
.....................................ld.evlglial.d
+ + + +++++ + ++++++ +++++++ ++ + ++ ++++ + ++ +
K02D10.1a 112 nlkatlendggvkcfgtgpdsirdhtdgdfihkvdmsIApKAVVCSYDaH 161
klypgarealkaLkerGikvailTngdr.naealle..algla.lfdaii
+ yp +++a ++L++ +++Tn d++++ ++ + ++g ++ +a +
K02D10.1a 162 FSYPKIMKASNYLQDP-SVEYLVTNQDYtFPGPVPGvvIPG-SgATSAAV 209
dsddvggvgpivvgKPkpeifllalerlgvkpeevgpevlmvGDginDap
++ + +p v+gKP++ ++ +l+r+ v+p+++ +m+GD++ +++
K02D10.1a 210 TAVTGR--DPKVFGKPHKPMADFLLRRAHVDPKRT----VMFGDRLDTDI 253
alaaAG<-*
++++A+
K02D10.1a 254 MFGNAN 259