hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K09H9.6
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Query:  K09H9.6  CE18041    status:Partially_confirmed TR:O44991 protein_id:AAB97575.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Brix     Brix domain                                    363.7     2e-105   1
Leo1     Leo1-like protein                                5.0        1.4   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Brix       1/1      58   369 ..     1   272 []   363.7   2e-105
Leo1       1/1     392   434 ..   336   377 .]     5.0      1.4

Alignments of top-scoring domains:
Brix: domain 1 of 1, from 58 to 369: score 363.7, E = 2e-105
                   *->vLvTtSrkpsrrlrsfmkdLrrlmkPnskkrlknRgknslhpFEDkd
                      +Lv+++++++++++ +  dLr+l +Pn++k+lk  ++n++     kd
     K09H9.6    58    CLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKILKRNNI-----KD 99

                   lleeaaekgvtdllvlgehrkkpplsLtisrlpgdyrnGPtlyFkisnvk
                   +++  a +gvt+++vl++++    l L+++r+     +GPtl+Fk+++++
     K09H9.6   100 FIVNGAVLGVTNMMVLTSSDAS--LQLRMMRFS----QGPTLSFKVKQYS 143

                   lrrdiknsqkRprvgniltgskPlLifnnfttrlgehlkrvkelfqnlFp
                   l+r+++n+qkRp+++  l++s+Pl+++n+f+++  +hl +v++++qn+Fp
     K09H9.6   144 LARHVVNCQKRPVATDKLFKSSPLVVMNGFGDGTQKHLSLVQTFIQNMFP 193

                   gp.vdtlnskpigrrvvtfanqdtdyIffRhyrikfkksgssr.vkKLlk
                   +++vdt+++ +++r+++++++++td+I +Rh++i+++ sg++++vkKL++
     K09H9.6   194 SInVDTIQLGNLKRCLIVSYDEETDEIQMRHFAIRVVASGLNKsVKKLMQ 243

                   a.kpm.kgIP...................................k.nl.
                   a+k+m+k+IP+ ++ ++ ++   ++++ + +++ + ++ +++   k+++
     K09H9.6   244 AeKTMgKNIPnlstykdisdyflnpgqfrirtklnfsninhkiiiKkYSi 293

                   d.Sqllt.sa.y.sesE.ed.eqdve.l.q.l.grgnpggklprvkLqEi
                   + ++++++s+++ s+sE e+++q+ve +++ ++grg+++g++++v+L+Ei
     K09H9.6   294 YlNFPSFsSPgQlSDSEfEGdQQEVElPqDiSeGRGCGVGQKSNVRLHEI 343

                   GPRftLklikiqeGtlegeklaekew<-*
                   GPR+tL+l+ki+eG++ege+l++k++
     K09H9.6   344 GPRLTLELVKIEEGIDEGEVLYHKHN    369

Leo1: domain 1 of 1, from 392 to 434: score 5.0, E = 1.4
                   *->gkgsgsesreakaqttYseded.egsdeEtrkekevkkegasr<-*
                      +++++se+r+ ++ t+ +e+ d e+++  + +e+   k++a +
     K09H9.6   392    RREQESEQRVIRRLTIVKEQQDaEEAEVKAIRENAARKQAAAT    434

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