hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/M01B12.3
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Query:  M01B12.3  CE18061    status:Partially_confirmed TR:O61861 protein_id:AAC17561.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
p16_Arc  ARP2/3 complex 16 kDa subunit (p16-Arc)        299.7    3.5e-86   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
p16_Arc    1/1       8   152 .]     1   154 []   299.7  3.5e-86

Alignments of top-scoring domains:
p16_Arc: domain 1 of 1, from 8 to 152: score 299.7, E = 3.5e-86
                   *->tdfRkvDVDsfdeekfreededlVeaeeAevesaaigPderevrslL
                      t++Rk+DVDsfd+e+++e+de        +v+++++gPder+v+++L
    M01B12.3     8    TSYRKLDVDSFDPEQYDENDE--------TVDTPGLGPDERAVQGFL 46

                   tqGksldALqaaLtnpPiktkdQavKdralniVlkVLtsfKaaDIeaaVk
                   ++++++dAL+aaL++pP+ktkdQ+vKdra+++V+kVL+sfK+a+Iea+V+
    M01B12.3    47 SSNRLEDALHAALLSPPLKTKDQNVKDRATQLVTKVLQSFKNAEIEATVQ 96

                   kLddeeiDiLMKYiYrGletPsGegsSalvLLkWHEKlvakgGlGsIVRV
                   kL++ee+DiLMKY+Y+++e+++ +++++++LL+WH++lvak+G+G+I+RV
    M01B12.3    97 KLSIEESDILMKYVYKSMEIGA-DAAVCQSLLAWHAQLVAKFGHGAIMRV 145

                   LsdRkrv<-*
                   +s+R+r+
    M01B12.3   146 FSGRQRL    152

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