hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/M176.6b
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Query:  M176.6b  CE30290  locus:kin-15 tyrosine-protein kinase (KIN15\/KIN16 subfamily) status:Partially_confirmed TR:Q8T8M7 protein_id:CAD24482

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
pkinase  Protein kinase domain                          178.4    1.2e-49   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
pkinase    1/1      80   388 ..     1   294 []   178.4  1.2e-49

Alignments of top-scoring domains:
pkinase: domain 1 of 1, from 80 to 388: score 178.4, E = 1.2e-49
                   *->yelleklGeGsfGkVykakhkd.........ktgkiVAvKilkkeke
                           klG+G fG+V  + + ++++++++++  +  VAvK+ ++  +
     M176.6b    80    EISEDKLGSGFFGEVCYGLLSMrtsntetdtLQKLSVAVKQSNDPTQ 126

                   sikekrflrEiqilkrLs.HpNIvrligvfed..tddhlylvmEymegGd
                   + +ek++  E +++  + + pNI+ +ig+++ ++ + +  l+ E++e+Gd
     M176.6b   127 ENQEKMIEDETKLMCAIGrNPNILAIIGAVTAnsGSARNLLIVEFVECGD 176

                   Lfdylrrng.......................................gp
                   L+++l ++++  +++   ++++   +++ ++++   ++++++  +++ +
     M176.6b   177 LLKFLEEKKsifkdelvyekngyllpksirrktymfneneddvieeslDS 226

                   lsekeakkialQilrGleYLHsngivHRDLKpeNILldendgtvKiaDFG
                   l   +++++ +Qi++G+eYL s  +vHRDL+ +N+Ll++n  t++iaDFG
     M176.6b   227 LCTSDLLSFSYQIAEGMEYLASIPCVHRDLALRNVLLNKN-KTIRIADFG 275

                   LArlle..sssklttfvGTp...wYmmAPEvilegrgysskvDvWSlGvi
                   LAr++  + +++ t +vGTp + ++m APEv ++  + + k+DvWS+Gv
     M176.6b   276 LARKYQvdGYYRITKGVGTPmpaRWM-APEV-MREGKCTEKSDVWSYGVS 323

                   LyElltggplfpgadlpaftggdevdqliifvlklPfsdelpktridple
                   LyE+++ g                         +lP+s+          +
     M176.6b   324 LYEMFSLG-------------------------ELPYSN-------VSNS 341

                   elfriikrpglrlplpsncSeelkdLlkkcLnkDPskRpGsatakeilnh
                    +f+++ + g  lp p++c + ++d +k+ +n+D++ Rp   ++  +
     M176.6b   342 DVFEHVVQ-GNQLPMPQYCHPKMYDRMKQFWNFDATFRP---SFSKC--V 385

                   pwf<-*
                    +f
     M176.6b   386 EFF    388

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