hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/M7.10
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Query:  M7.10  CE03490    status:Partially_confirmed TR:Q21588 protein_id:CAA92742.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
DUF148         Domain of unknown function DUF148        205.0    1.2e-57   1
Cauli_DNA-bind Caulimovirus DNA-binding protein           6.6       0.61   1
Bul1_C         Bul1 C terminus                            2.9        3.8   1
AMA-1          Apical membrane antigen 1                 -0.8        2.8   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
AMA-1            1/1       3    17 ..     1    15 [.    -0.8      2.8
Bul1_C           1/1      95   118 ..    82   105 ..     2.9      3.8
Cauli_DNA-bind   1/1     108   133 ..     1    26 [.     6.6     0.61
DUF148           1/1      52   173 ..     1   128 []   205.0  1.2e-57

Alignments of top-scoring domains:
AMA-1: domain 1 of 1, from 3 to 17: score -0.8, E = 2.8
                   *->MkkiYcILiLsalyL<-*
                       k i+ +L+Lsa+ L
       M7.10     3    FKRIFLVLLLSAIAL    17

Bul1_C: domain 1 of 1, from 95 to 118: score 2.9, E = 3.8
                   *->kiFkeflekieeYrdkFekNqtkL<-*
                      +++kef+ ++ +Y  +  kNqtk+
       M7.10    95    AVYKEFKANVTAYLAEVKKNQTKV    118

Cauli_DNA-bind: domain 1 of 1, from 108 to 133: score 6.6, E = 0.61
                   *->LaailsEieevlsdqkkikaeIkaiL<-*
                      La + +    v+s++ +++ +I+aiL
       M7.10   108    LAEVKKNQTKVISNLSSVAEKIDAIL    133

DUF148: domain 1 of 1, from 52 to 173: score 205.0, E = 1.2e-57
                   *->PpFLrnvpaearqeffaIlknNesLTiaqkeeqlqaWAekygGvsdq
                      PpF++n+++ea+ ef++++k N+sLT+aq+++q + ++ekyg v++
       M7.10    52    PPFIANLSMEAKIEFDSVFK-NKSLTLAQIDAQDALLVEKYG-VAAV 96

                   ykeFqknvkaqeaevkknvtqvIsnLSPaAKsVqaqLeaIldNknlTrkq
                   ykeF++nv+a +aevkkn+t+vIsnLS    sV+++++aIl+Nk++Trk+
       M7.10    97 YKEFKANVTAYLAEVKKNQTKVISNLS----SVAEKIDAILSNKDQTRKA 142

                   kheaiqaLkkqypqEvraLffIakqirgrgg<-*
                   +hea+ aL+k++p+E+++L fI++++r ++g
       M7.10   143 QHEALIALRKEFPIEFDVLRFISSPKRDPKG    173

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