hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/R06F6.5b
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Query:  R06F6.5b  CE18121    status:Predicted TR:O62340 protein_id:CAA86784.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
MPPN     MPPN (rrm-like) domain                         158.4    1.2e-43   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MPPN       1/1     192   277 ..     1   143 []   158.4  1.2e-43

Alignments of top-scoring domains:
MPPN: domain 1 of 1, from 192 to 277: score 158.4, E = 1.2e-43
                   *->gekedsdtwsdlsAVtVFGFPpsitnlvLlhFsrfGeIvshvrvlks
                      +e++++dtw     VtVFGF+ps+++++L++Fsr+Ge+vsh
    R06F6.5b   192    EEADAADTW-----VTVFGFQPSQVSILLNLFSRHGEVVSH------ 227

                   skglnpktfRiFHnHDtGCDEnDstvnksitLksksneltakKYpiptng
                                                               ++p++g
    R06F6.5b   228 --------------------------------------------QTPSKG 233

                   NWmhltYssrssAaKALskNGtiingsvivGVkyspatdKqvinkk<-*
                   N++h++Ys++++A++A+s+NGt++++++++GV+++  t+K+vin++
    R06F6.5b   234 NFIHMRYSCVTHAQQAISRNGTLLDQDTFIGVVQC--TNKDVINGS    277

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