hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/R06F6.9
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Query:  R06F6.9  CE01625   enoyl CoA hydratase\/isomerase status:Partially_confirmed TR:Q09603 protein_id:CAA86779.1

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
ACBP         Acyl CoA binding protein                   182.8    1.3e-51   1
ECH          Enoyl-CoA hydratase/isomerase family        72.0    2.9e-20   1
CLP_protease Clp protease                                 8.9        0.3   1
Bro-N        BRO family, N-terminal domain                4.2        4.6   1
DUF359       Protein of unknown function (DUF359)         3.9        2.5   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
ACBP           1/1      25   109 ..     1    89 []   182.8  1.3e-51
DUF359         1/1     151   177 ..    96   123 ..     3.9      2.5
Bro-N          1/1     173   190 ..     1    19 [.     4.2      4.6
ECH            1/1     138   313 ..     1   176 []    72.0  2.9e-20
CLP_protease   1/1     298   315 ..   168   185 .]     8.9      0.3

Alignments of top-scoring domains:
ACBP: domain 1 of 1, from 25 to 109: score 182.8, E = 1.3e-51
                   *->lqedFeaAaekvkkLkknGpvkPSneekLkLYsLYKQATvGDvnter
                      +q+dFe+A++++k+Lk++    P+n++kL+LY+L+KQAT+GDv+ +r
     R06F6.9    25    AQADFEKAQKNLKTLKEE----PDNDVKLQLYGLFKQATAGDVQGKR 67

                   PGmfDlkgrAKWDAWnelkGmSkeeAmkaYIakVeeLiakya<-*
                   PGm+D++grAK+DAWn+lkG++++eA+++Y+++V++Li+++a
     R06F6.9    68 PGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLISEEA    109

DUF359: domain 1 of 1, from 151 to 177: score 3.9, E = 2.5
                   *->ISleLiksIkkAleGliengkkvvivVd<-*
                      ++le +  I+kAle    n+k++ i V+
     R06F6.9   151    LTLEMYQGIQKALE-VSNNDKSTSITVI    177

Bro-N: domain 1 of 1, from 173 to 190: score 4.2, E = 4.6
                   *->evrvvvdengevwfvakdv<-*
                      +++v++  ng+++++++d+
     R06F6.9   173    SITVITA-NGSYYCAGNDL    190

ECH: domain 1 of 1, from 138 to 313: score 72.0, E = 2.9e-20
                   *->avikldrPeeavNalsaelltElieAlekleqDpsvravVLtGagpg
                       +i l+rP+ + Nal+ e+   +  Ale+  +D+s    V+t + +
     R06F6.9   138    FKIALNRPK-KFNALTLEMYQGIQKALEVSNNDKSTSITVITAN-GS 182

                   aFsaGaDikemaagfkeplaeqa.....qfsleaqdlwskledlpkPViA
                   + +aG D++ + a   ++  eq  +  ++ + +  d +++  + +kP+iA
     R06F6.9   183 YYCAGNDLTNFKAA-AGGTKEQIadmanTAKVIMKDYVNAYINHEKPLIA 231

                   AVNGyAlG.GGlelALacDyrIAadnAkyvfGlpEvklGiiPGaGGtqrL
                    +NG A+G +  +l+++ Dy+IA+d+A+  f +p++ lG  P +  + +
     R06F6.9   232 LINGPAVGiAVTVLGMF-DYVIATDKAS--FHTPFAPLGQSPEGVSSYTF 278

                   pRivGvsaAlemiltGrrirAqEAlkmGlVdkVVp<-*
                   p i G  +A em+l +++i+Aq A++ GlV++VVp
     R06F6.9   279 PLIMGSLRASEMLLVCKKISAQTAKDYGLVNEVVP    313

CLP_protease: domain 1 of 1, from 298 to 315: score 8.9, E = 0.3
                   *->SAqEAkeYGLvDkVleer<-*
                      SAq Ak+YGLv +V+ +
     R06F6.9   298    SAQTAKDYGLVNEVVPDA    315

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