hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/R13A5.12
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Query:  R13A5.12  CE21123    status:Confirmed TR:Q95Y89 protein_id:AAK84463.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
BRCT     BRCA1 C Terminus (BRCT) domain                  40.9    3.4e-11   1
WT1      Wilm's tumour protein                            2.6        6.9   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BRCT       1/1     311   398 ..     1    99 []    40.9  3.4e-11
WT1        1/1     429   441 ..     1    13 [.     2.6      6.9

Alignments of top-scoring domains:
BRCT: domain 1 of 1, from 311 to 398: score 40.9, E = 3.4e-11
                   *->eklfsgltfvltgtknaaviieamldseer.elkelieklGGkvt.s
                         f+g++f+l ++             ++++ l ++i++ GG v  +
    R13A5.12   311    KTMFKGCVFYLNRE-------------CPKeALTFIIRNGGGIVGwE 344

                   l........skktthvivgenagsklekalkaialgipivteeWlldcik
                    ++++ + +sk+++h +v+++   kle  ++        v ++W++dc++
    R13A5.12   345 GgptdlkadSKNISHHVVDRPM-DKLEVNRL-------YVQPQWVFDCLN 386

                   egkllpedpyll<-*
                    ++ lp ++y
    R13A5.12   387 ARRKLPTERYMP    398

WT1: domain 1 of 1, from 429 to 441: score 2.6, E = 6.9
                   *->mGsDvRDLnALLP<-*
                      mG Dv DL A +P
    R13A5.12   429    MGKDVSDLEAAIP    441

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