Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm4/seq/T07A9.10
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Query: T07A9.10 CE17219 acetylcholine regulator status:Confirmed TR:O44412 protein_id:AAK39282.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Sec1 Sec1 family 286.6 3.2e-82 1
UPF0180 Uncharacterised protein family (UPF0180) 7.7 0.88 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
UPF0180 1/1 191 201 .. 75 85 .] 7.7 0.88
Sec1 1/1 31 558 .. 1 683 [] 286.6 3.2e-82
Alignments of top-scoring domains:
UPF0180: domain 1 of 1, from 191 to 201: score 7.7, E = 0.88
*->EVcneveqrlr<-*
E+c+ veq+l+
T07A9.10 191 EICQRVEQKLK 201
Sec1: domain 1 of 1, from 31 to 558: score 286.6, E = 3.2e-82
*->ewKVLvlDeettpilSscltvsdLleTPVegItlverienkRepEpl
VLvlD++ + +++scl+ +++ e eg+tlve++ +Re p+
T07A9.10 31 ---VLVLDKSAMVVVNSCLSLNEVFE---EGVTLVEDLTRNRE--PM 69
pdvkAiyFvsrPteenidrLiqdlrsearkpk....YseyhifFtRWnvi
p++ Aiy +s P+ e+id+Li+d+ s ++k +++++Y+++hifF +++
T07A9.10 70 PSMDAIYIIS-PVAESIDILINDF-SRKTKFNpgnsYRSAHIFFL--DPC 115
skslledLaeadvaggaveavksvkEiyldFiplesDLFSLdspdenlla
++l+e+L ++ + + + +k++kE +l++ p+es+ F+ +s+
T07A9.10 116 CDELFEKLSKSPAVK--W--IKTLKELNLNLKPVESQIFTVNSQF----- 156
frllyspgtNmYYPNRltaeedealleriadgLftLcatlgeiPisIRyk
+++ ++++adg+++Lcatl++ P+ R +
T07A9.10 157 -----RGD-----------------MTKTADGIVSLCATLNIHPT-LRFQ 183
ggseraaeklAkkveqklrenlkadenslfegrrvgtGtfsktrpqLLIL
++++ + +++ ++veqkl e f +++ ++t L+ L
T07A9.10 184 SDFA-QSSEICQRVEQKLKE---------FGNEG------MGTDAELVVL 217
DRnvDpiTPLLhqlTYQAmvhDllgIennrVklekeskenktpGigekrk
DR++D+++PLLh++T QAmv D+ ++ ++++++ + G++
T07A9.10 218 DRSFDLVSPLLHEVTLQAMVVDVTAFKDGVYRYT-------EAGDS---- 256
pdkevdLdekanDefWvelrhlnFaeVgeevkkllkefqekkdeikkkks
ke++Lde D W +lrh+ +eV + v+k +k+f++ ++ + +
T07A9.10 257 --KEIVLDE--KDQNWLDLRHKLLPEVMKSVNKMVKDFKNTN-KTEPENI 301
siGlsGedeaAnslltddtadlkqfVkklPqlqkekglistHtslaeeil
++ + +d + +V l ++k+k++ + +sl ee+
T07A9.10 302 KN--------------QSSKDFSTTVRTLQPYLKMKAKMAAYISLTEECR 337
kvvkkrYnldkllevEQdLasgtdaeGEKiK.dklndiiel..Lidkavs
+++ +l+k++ +EQd a ++ e ++ ++ + + +l+++i +a++
T07A9.10 338 SKYFD--SLEKIIALEQDMAVEHTPE--HVRiTDSQAVGRLstFILPAIP 383
ledkLRLilLYsLcknglsPenkvenl.lkllqhqgygpealktvsnLkk
e+ LRLil+ L+ + + +e++ ++ll h +++++ +++++++
T07A9.10 384 TETRLRLILIFMLTIGKDK----DEQYfNRLLHHTDIPESEFQIIKRML- 428
lGllssktggddllitesksskkqseptYIQWFgkktisettrqlsgwvp
++kt +k q +++ + + +++ +s+w p
T07A9.10 429 --IWRDKT------------QKSQFQHR------RPPPEDERFIASRWDP 458
fimdgvenlypqhhlfhnldLkssrdpailspearvnldsplipqllgrs
i++ +e +y+++ ld+++++ + g
T07A9.10 459 KIKNLIEEIYERR------------------------LDEREFK-VAGKK 483
sknkltedvyaligpkhkrkapsktrvqkkrrsgelHAqdiIVFvvGGvT
s + + +a++g+ ++ k+ k ++iI+FvvGG+T
T07A9.10 484 STSDFRPAASARYGSGLAGKPREK--------------RKIIIFVVGGIT 519
ysEaralrelnkakkgkgigkrviiggTailNpkkfLdeiselg<-*
ysE+r ++el+k++++ vi+g+++il+p++fL+++++ +
T07A9.10 520 YSEMRVAYELSKKTNT-----TVILGSDEILTPSSFLESLRDRN 558