hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/T09F3.2
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Query:  T09F3.2  CE02342   carrier protein C2 status:Confirmed TR:Q27244 protein_id:CAA88869.1

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
mito_carr Mitochondrial carrier protein                 240.5    2.4e-68   4

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
mito_carr   1/4       6    40 ..     1    35 [.    38.4  4.2e-09
mito_carr   2/4     152   199 ..    74   125 .]    44.9  6.9e-11
mito_carr   3/4     203   291 ..     1   125 []    99.2  8.1e-26
mito_carr   4/4     298   381 ..     1   119 [.    66.9  6.7e-17

Alignments of top-scoring domains:
mito_carr: domain 1 of 4, from 6 to 40: score 38.4, E = 4.2e-09
                   *->sflksllaGgiAGaiaatvtyPlDvvKtRLQtqgs<-*
                        + ++++G+++G++++++t+Pl+vvKtR+Q++++
     T09F3.2     6    EAAIHFIGGAVGGTTGTAITCPLEVVKTRMQSSRG    40

mito_carr: domain 2 of 4, from 152 to 199: score 44.9, E = 6.9e-11
                   *->fkkivkeEGliktrgLYkGlgpnllrvapygaaiyFgtYEqlKklll
                      + +++k+EG i  ++LYkGl+pnl++vap+  a+yF tY + K++
     T09F3.2   152    ITQVIKTEG-I--GALYKGLIPNLVGVAPS-KAVYFYTYSTSKRFWN 194

                   kkkge<-*
                    ++
     T09F3.2   195 ESEVL    199

mito_carr: domain 3 of 4, from 203 to 291: score 99.2, E = 8.1e-26
                   *->sflksllaGgiAGaiaatvtyPlDvvKtRLQtqgssslskssvnsdv
                      s +++++++g AG++aa++++P+++vKtRLQ+++++
     T09F3.2   203    SAIVHMVSAGSAGFVAASAVNPIWLVKTRLQLHQGH----------- 238

                   gksksyrsakksnasasrkYkgildcfkkivkeEGliktrgLYkGlgpnl
                                        gi++ +k++++ EG +  +g+YkG++++
     T09F3.2   239 --------------------IGIWQMIKRVYHREG-F--KGFYKGVTASY 265

                   lrvapygaaiyFgtYEqlKklllkkkge<-*
                   ++v+ +  +i+F +YE+++ +ll++ +e
     T09F3.2   266 AGVSET--MIQFCIYEYFRGVLLSDANE    291

mito_carr: domain 4 of 4, from 298 to 381: score 66.9, E = 6.7e-17
                   *->sflksllaGgiAGaiaatvtyPlDvvKtRLQtqgssslskssvnsdv
                      +fl+ ++aGg A +ia +v+yP +vv+tRL    ++s
     T09F3.2   298    DFLNFMVAGGSAKFIACVVAYPHEVVRTRLREETGKS---------- 334

                   gksksyrsakksnasasrkYkgildcfkkivkeEGliktrgLYkGlgpnl
                                       +g++ ++++++k EG++   + Y+Gl++ l
     T09F3.2   335 --------------------RGFFKTLYQLYK-EGYP---AMYRGLSVQL 360

                   lrvapygaaiyFgtYEqlKkll<-*
                   +r +p  +ai+ gtYE++  +l
     T09F3.2   361 MRTVPN-TAITMGTYEFVVYML    381

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