hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/T12G3.4
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Query:  T12G3.4  CE06440   strictosidine synthase like status:Partially_confirmed TR:Q22437 protein_id:CAA92983.1

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
Str_synth Strictosidine synthase                        674.7   2.7e-202   1
zf-AN1    AN1-like Zinc finger                            8.1        0.6   1
L15       Ribosomal protein L15                           6.3          8   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
zf-AN1      1/1     155   166 ..    32    43 .]     8.1      0.6
L15         1/1     203   211 ..     1     9 [.     6.3        8
Str_synth   1/1      46   442 ..     1   430 []   674.7 2.7e-202

Alignments of top-scoring domains:
zf-AN1: domain 1 of 1, from 155 to 166: score 8.1, E = 0.6
                   *->kHdCpgdykteg<-*
                      +HdC+g yk+++
     T12G3.4   155    NHDCDGSYKKMN    166

L15: domain 1 of 1, from 203 to 211: score 6.3, E = 8
                   *->KVLGkGeLt<-*
                      K+LG+GeL+
     T12G3.4   203    KILGAGELP    211

Str_synth: domain 1 of 1, from 46 to 442: score 674.7, E = 2.7e-202
                   *->lslflslalfLlllillysllseriinktasfkkyrldpppgllGpl
                      +s++++++l+Ll+++++++ll++riin+++++++++l+++++l+G+l
     T12G3.4    46    GSTPVKIVLGLLGSLIIAGLLTNRIINAPIKAVEFDLGDKIPLEGVL 92

                   sfnfdnlLtGaEfllvgqvqgPeslkydeeenlvsvndaiYtGivDGavi
                   ++n++  Lt+aE+llv+qv+gPesl++de++++      +Y+G+++G+++
     T12G3.4    93 AVNKR--LTDAELLLVDQVYGPESLVLDEKNSK------LYAGFKTGIIA 134

                   rlsseelrekivvesslcdgkrspcdslkteplCGRPLGLaFdkkggdLy
                   +++++e+rekiv++++l++g++++++s+k+++lCGRPLGL+++++g +L+
     T12G3.4   135 EIDMKEGREKIVHAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDVG-ELV 183

                   vADAYlGLlkVgpeGgkkt.ivtaaekladevdGvpfKflNdLDVdpeTG
                   +ADAYlGL++++++++k+++i++a+e++a++++++p+K+lNdLD+ p+ G
     T12G3.4   184 IADAYLGLFAINWQEEKVVkILGAGELPANNENAAPIKYLNDLDILPD-G 232

                   vVYFTDSSskydrrdfilailegdptGRllkYDpsTKvttVLldeLyFpN
                   +V+FT+SS+k+d+rdfil+++e++p+GRll+YDp++K+++VL+d+LyFpN
     T12G3.4   233 RVIFTESSTKFDDRDFILDLFEHRPNGRLLIYDPRKKDLRVLKDGLYFPN 282

                   GlaLSpDgsFGKnAPWRvlvaEttmarirkYWlkgekaGtasvksEvFae
                   G++LS+++++GKnAPWRvl++E+++ar++++W+++++++ta+vk+++++e
     T12G3.4   283 GVQLSIEKGMGKNAPWRVLYSEMGLARVMQIWVPRDHYSTAPVKTSPLIE 332

                   gLPGyPDNIRrdgdGhfWValvskrstehPnltrllmsyPsvrkflakll
                   +LPGyPDNIR++++Gh++++++s+rs+    ++r+l+++Psvr+f++k+l
     T12G3.4   333 NLPGYPDNIRLTKSGHLLIPIASHRSE----EDRFLEQNPSVREFITKIL 378

                   klqvlplllkngknPNdiaaRlvHsvndvivlAPkhavvvkvdlntGniv
                   ++q+l+++++++++                    ++++v+kv+++tG+i+
     T12G3.4   379 SPQALGYVANYVAD--------------------VEGLVIKVNTETGQII 408

                   esyhDstgkkvsliseVeekdGhLylGSvlnsyi<-*
                   esyhD+tg+++++++++++++G+++lGS++n+yi
     T12G3.4   409 ESYHDQTGRVEAVSIAIDDGKGRMLLGSDVNYYI    442

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