Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm4/seq/T14F9.1
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Query: T14F9.1 CE07497 ATPase subunit status:Confirmed SW:Q22494 protein_id:AAA91266.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
V-ATPase_H V-ATPase subunit H 944.1 3.7e-280 1
Armadillo_seg Armadillo/beta-catenin-like repeat 11.7 0.16 4
FGGY_C FGGY family of carbohydrate kinases, 3.4 7.4 1
ATP-sulfurylase ATP-sulfurylase 1.7 9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Armadillo_seg 1/4 198 229 .. 1 30 [. 7.0 3.4
Armadillo_seg 2/4 240 281 .. 1 40 [] 2.7 57
ATP-sulfurylase 1/1 376 389 .. 336 349 .] 1.7 9
Armadillo_seg 3/4 377 397 .. 13 31 .. 0.3 2.7e+02
V-ATPase_H 1/1 14 413 .. 1 438 [] 944.1 3.7e-280
FGGY_C 1/1 394 419 .. 209 234 .] 3.4 7.4
Armadillo_seg 4/4 425 448 .. 18 40 .] 1.7 1.1e+02
Alignments of top-scoring domains:
Armadillo_seg: domain 1 of 4, from 198 to 229: score 7.0, E = 3.4
*->npenkqavveaGalppLvqLLs..pdeevqee<-*
++e++ + v++ +++ Lv L++++++++q +
T14F9.1 198 HDEYRHEFVDSDGVQTLVTALNgkTNFQLQYQ 229
Armadillo_seg: domain 2 of 4, from 240 to 281: score 2.7, E = 57
*->npenkqavveaGalppLvqLLs..pdeevqeeAawALsNLaa<-*
n + + +G +++L + Ls++++e+v + ++ N+ +
T14F9.1 240 NADIARKAPSLGLIQALGDILSesTKEKVIRIILASFVNILS 281
ATP-sulfurylase: domain 1 of 1, from 376 to 389: score 1.7, E = 9
*->EVvkiLveyyksla<-*
EVvkiL++ ++s +
T14F9.1 376 EVVKILIKLLESSH 389
Armadillo_seg: domain 3 of 4, from 377 to 397: score 0.3, E = 2.7e+02
*->alppLvqLLs..pdeevqeeA<-*
++++L++LL+++ d+ ++++A
T14F9.1 377 VVKILIKLLEssHDPLILCVA 397
V-ATPase_H: domain 1 of 1, from 14 to 413: score 944.1, E = 3.7e-280
*->miadtshlqeiasevRarkiNWqsYlRSqmIseeDydfIkaleqaks
m+++ts+lq +a+e+R++k+NW+sY+RSqmI+e+Dy+fI+++e+aks
T14F9.1 14 MLNATSRLQLEAQELRNNKPNWGSYFRSQMIQEDDYNFITSFENAKS 60
keeradvLsanndatSGFKVNGkaaktflnLlShiskddtVqYvLtLiDD
keer++vL+ann+ NG+aakt++nL+++++kd++V+YvLtL+DD
T14F9.1 61 KEERDQVLAANNA-------NGQAAKTMANLITQVAKDQNVRYVLTLFDD 103
mLqeDksRvsiFkdaAaklkrtiwqlFlglLnRqDqfivhmtarIiAKLA
mLqeDksRv++F++aAa++krt+w+++lg+L+RqD+fiv+++++IiAKLA
T14F9.1 104 MLQEDKSRVELFHSAAARQKRTVWSQYLGILQRQDNFIVNQMSSIIAKLA 153
cwGpelmeksdLnyylnfLkeqLqsqstnndYiqtvaRCLQmmLrvdEYR
c+G+++me++dL+yy++fLkeqL++ st+ndY++t+aRCLQmmLr+dEYR
T14F9.1 154 CFGTTRMEGQDLQYYFSFLKEQLKN-STTNDYMNTTARCLQMMLRHDEYR 202
DVIWLHEKKFmPTLFKIfafvaedGvstliaaLlrsnkvgfQLQYqliFc
++fv++dGv+tl++aL ++k++fQLQYqliF+
T14F9.1 203 -----------------HEFVDSDGVQTLVTAL--NGKTNFQLQYQLIFA 233
iWlLTFNphiANekaqkrfnlIpiLsdILsestKEKVtRIvLAifrNlie
+W+LTFN++iA +ka ++++lI++L+dILsestKEKV+RI+LA+f+N+++
T14F9.1 234 VWCLTFNADIA-RKA-PSLGLIQALGDILSESTKEKVIRIILASFVNILS 281
kaqdqevkKeaalaMvQckvLKqLqlLeqRKydDEDlteDvkfLtEeLee
k++++evk+eaal+MvQck+LK+L+l++++KydD+Dl++DvkfLtEeL+
T14F9.1 282 KVDEREVKREAALQMVQCKTLKTLELMDAKKYDDPDLEDDVKFLTEELTL 331
svQdLSSFDEYasELrSGrLeWSPvHKSekFWrENAkRLNeknYeLLKiL
sv+dLSS+DEY+sE+rSGrL+WSPvHKSekFWrENA+++N+k++e++KiL
T14F9.1 332 SVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFNDKQFEVVKIL 381
vhLLEkKVRNGDVNAseDpiiLaVAchDiGeYVRhYPRGKs<-*
++LLE+ s+Dp+iL+VA+hDiGeYVRhYPRGK+
T14F9.1 382 IKLLES---------SHDPLILCVASHDIGEYVRHYPRGKT 413
FGGY_C: domain 1 of 1, from 394 to 419: score 3.4, E = 7.4
*->laEasqalnlerkkhyPpeteveeyq<-*
l++as +++++ + +++ +t ve+yq
T14F9.1 394 LCVASHDIGEYVRHYPRGKTVVEQYQ 419
Armadillo_seg: domain 4 of 4, from 425 to 448: score 1.7, E = 1.1e+02
*->vqLLs.pdeevqeeAawALsNLaa<-*
++LL+ +d++v+ A+ A+ L
T14F9.1 425 MRLLTaEDPNVRYHALLAVQKLMV 448