Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm4/seq/T16G12.1
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Query: T16G12.1 CE26001 Aminopeptidase status:Partially_confirmed TR:Q22531 protein_id:CAA82971.2
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Peptidase_M1 Peptidase family M1 869.3 2.7e-300 2
SSB Single-strand binding protein family 5.1 5.3 1
DUF643 Protein of unknown function (DUF643) 4.4 3.9 1
Pox_G5 Poxvirus G5 protein 0.0 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
SSB 1/1 201 223 .. 82 110 .] 5.1 5.3
DUF643 1/1 326 338 .. 106 118 .] 4.4 3.9
Peptidase_M1 1/2 81 475 .. 1 436 [] 383.8 1.6e-132
Pox_G5 1/1 729 739 .. 250 260 .. 0.0 10
Peptidase_M1 2/2 998 1402 .. 1 436 [] 493.9 1.4e-170
Alignments of top-scoring domains:
SSB: domain 1 of 1, from 201 to 223: score 5.1, E = 5.3
*->yrkyenpdGkkrtrleislRiadkiefld<-*
y++y++p+G+++++ ia ++e ++
T16G12.1 201 YTSYNDPQGNTHYM------IATHMEPFS 223
DUF643: domain 1 of 1, from 326 to 338: score 4.4, E = 3.9
*->CLekLGEkksieF<-*
CL LGE+ i F
T16G12.1 326 CLYQLGEYTGIKF 338
Peptidase_M1: domain 1 of 2, from 81 to 475: score 383.8, E = 1.6e-132
*->LPttvkPlhYdLtlkpkf.....gnlpekpnnftFsGsvtItltnqa
LP ++ + Y L ++p+f++++ + pek nftF+G+++I++ +a
T16G12.1 81 LPPNLYAIDYSLWFQPYFpspgvQYAPEK--NFTFDGRASIQV--EA 123
tkaatdeIvLhakdltisstgegvrvtlvlvngsqklpesvefslqsetd
+a+ d +L+a ++i+s ++v +g ++v+++ s++
T16G12.1 124 LVAS-DRFILNAYNFKIQS------YKVVDIDG-----TVVPINSISQD- 160
flavddnkekltinlpealsagqggpytLkIeyegklndismlGfYrseY
d + + i+ ++ ++agq y++++ y+g +n+ + G+Y ++Y
T16G12.1 161 ----DTTQQLSLITNANGVVAGQI--YNIEFVYTGIINPYTDGGVYYTSY 204
tdgkdgetkymatTQfeeptdARraFPCfDEPafKATFtitiihpkgtta
d+ g t+ym++T++e p +AR++FP+ DEP++KA Ftit++ p+ +a
T16G12.1 205 NDP-QGNTHYMIATHME-PFSARKVFPSLDEPSYKAKFTITVQYPASQVA 252
lSNmpvisttkdddgptrvittFetTpkMStYLlAfiVGeleyietetkd
lSNm + ++tk d+ + + tF +TpkMS+YL+Af+VG + + + +k+
T16G12.1 253 LSNMMETEPTKIDNI--WSTITFPQTPKMSSYLIAFAVGPYVNSQYVNKH 300
gysarevpvrvyarpgaknagqgqyalevtkkllefyedyfgipYplpKl
+++r + +pg ++ q+a ++++l + +y+gi++pl K
T16G12.1 301 N-----TLTRAWGWPGTEQ--YLQFAAQNAGECLYQLGEYTGIKFPLSKA 343
DqvAvPdFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeviaHELA
Dq+ +P+F aGAMENWGLi+y +++ y+p + ++++++ a v++HELA
T16G12.1 344 DQLGMPEFLAGAMENWGLIIYKYQYIAYNPTTMTTRNMEAAAKVMCHELA 393
HQWFGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfvlrd
HQWFG+LVT +WWddL LNEGFA y+ ++ ++++ + +++ vl d
T16G12.1 394 HQWFGDLVTTAWWDDLFLNEGFADYFMTFIQKSVYPQQATYLDTLQVL-D 442
dvaqlalasDslgsshPitnklvevntpaeiseiFdsaitYaKG<-*
++ q l++D+ +hP+ + p Fd +itY+KG
T16G12.1 443 EL-QVGLTADVRYDAHPLV---YP-DGP-----AFD-DITYNKG 475
Pox_G5: domain 1 of 1, from 729 to 739: score 0.0, E = 10
*->vyCDgiDAEFv<-*
+y DgiDAEFv
T16G12.1 729 LYRDGIDAEFV 739
Peptidase_M1: domain 2 of 2, from 998 to 1402: score 493.9, E = 1.4e-170
*->LPttvkPlhYdLtlkpkfgnlpekpn.....nftFsGsvtItltnqa
+++v+P +Y+L+l++ n+p++++ + +n+tFs ++t+t+ q
T16G12.1 998 -IDAVFP-YYKLDLQV---NIPGSGPyqwyeNMTFSATSTVTF--QL 1037
tkaatdeIvLhakdltisstgegvrvtlvlvngsqk.lpesvefslqset
+t++I+++a++l+++ v+++l+ +n+++ ++p +++fs+++++
T16G12.1 1038 V-SPTSSITINAHRLMFDP----VSIRLYNENDENAhTPIPIDFSKVMKD 1082
dflavddnkekltinlpealsagqggpytLkIeyegklndismlGfYrse
++ k+ +ti+++++++++++ +y L+Iey+g++ ++ +G+ +
T16G12.1 1083 --YD----KGTVTIPTMNNTVLYPN-QYSLFIEYTGFIFQNPDEGDASNT 1125
YtdgkdgetkymatTQfeeptdARraFPCfDEPafKATFtitiihpkgtt
Y +g ++ + +++tT+fe+ AR++ PC+DEP++K F++++ hp++++
T16G12.1 1126 YLGGLNNRKGWIFTTDFEGGPGARSLLPCWDEPSYKGQFEVSVFHPTDMI 1175
alSNmpvisttkdddgptrvittFetTpkMStYLlAfiVGeleyietetk
alSN +i++t d+g +++t+F+tT+ MStYLlA++VG+++++ t t+
T16G12.1 1176 ALSNEVDIQRTIYDNG--WTTTKFATTNQMSTYLLALCVGHFSNLATVTR 1223
dgysarevpvrvyarpgaknagqgqyalevtkkllefyedyfgipYplpK
+g v++rv++++g+++ g++al+vt+ +++f+e+yf +++pl+K
T16G12.1 1224 TG-----VLTRVWTWSGMEQ--YGEFALNVTAGTIDFMENYFSYDFPLKK 1266
lDqvAvP..dFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeviaH
lD++A+P+ +++aGAMENWGLi+ ++dp++++++d++ Vae++aH
T16G12.1 1267 LDVMALPeyTMNAGAMENWGLIIGEYSLFMFDPDYATTRDITEVAETTAH 1316
ELAHQWFGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfv
E++HQWFG++VT++WW+d LNEGFA y+ + g+d++ +pe + +++ +
T16G12.1 1317 EVVHQWFGDIVTLDWWNDIFLNEGFAQYWFANGIDNT--FPEQHAYSIDY 1364
lrddvaqlalasDslg.sshPitnklvevntpaeiseiFdsaitYaKG<-
+r+++++ al+ D+ ++ + P+ + +tp +F ++Y KG
T16G12.1 1365 NRFYMNHIALKYDCIPgVAKPVI----S-DTP----PVFG-IEPYYKG 1402
*
T16G12.1 - -