hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/T26C12.3
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Query:  T26C12.3  CE18287    status:Partially_confirmed TR:O61858 protein_id:AAC17556.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
ras      Ras family                                      86.1    1.7e-24   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ras        1/2     234   249 ..     1    16 [.     4.6      2.7
ras        2/2     289   381 ..    72   177 ..    81.4  4.2e-23

Alignments of top-scoring domains:
ras: domain 1 of 2, from 234 to 249: score 4.6, E = 2.7
                   *->KlVliGDsGVGKSsLl<-*
                       + ++G s VGK++++
    T26C12.3   234    RIAVLGSSKVGKTCFT    249

ras: domain 2 of 2, from 289 to 381: score 81.4, E = 4.2e-23
                   *->AqGfLLVYDITsrdSFenvkkWleeilrhadkdenvpivLVGNKcDL
                      ++G++++Y++ +r+SF +++  ++ +++  +  +n pivLVG K+D+
    T26C12.3   289    SNGIIIMYSVVDRQSFYHAAEIFKRLEHSRE--HNQPIVLVGSKKDM 333

                   eddedleltegqkRvVsteeGealAkelgAlpFmETSAKtntNVeeaFee
                   +           kRvV+  eG++lA+ lg +pF+E S K+n+ V eaFee
    T26C12.3   334 RV----------KRVVTSFEGQQLARTLG-IPFLEVSSKQNDCVFEAFEE 372

                   lareilkkv<-*
                   l+  i k++
    T26C12.3   373 LVSLIQKQN    381

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