hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/W01D2.1
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Query:  W01D2.1  CE18312   ribosomal protein L37 status:Confirmed TR:O62388 protein_id:CAB05635.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
Ribosomal_L37e Ribosomal protein L37e                   128.3    5.8e-35   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Ribosomal_L37e   1/1       2    55 ..     1    55 []   128.3  5.8e-35

Alignments of top-scoring domains:
Ribosomal_L37e: domain 1 of 1, from 2 to 55: score 128.3, E = 5.8e-35
                   *->tkGTpSfGKRnnktHirCRRCGrkSyHvqKkrCAaCGyprsarlRkY
                      tkGT++fGK++ k+H++C+RCG++S+H+qKkrCA+CGyp +a++R+Y
     W01D2.1     2    TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYP-DAKKRTY 47

                   nWsaKakr<-*
                   nW+aK++r
     W01D2.1    48 NWGAKSIR    55

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