hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/W02A2.1
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Query:  W02A2.1  CE21231  locus:fat-2 Fatty acid desaturase status:Confirmed TR:Q9XUB8 protein_id:CAB05304.1

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N
--------      -----------                               -----    ------- ---
FA_desaturase Fatty acid desaturase                     239.3    1.6e-68   1
DUF113        Protein of unknown function DUF113          4.5        2.6   1
XS            XS domain                                   3.0        8.6   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
XS              1/1     146   159 ..   110   124 .]     3.0      8.6
FA_desaturase   1/1      77   321 ..     1   296 []   239.3  1.6e-68
DUF113          1/1     315   332 ..   264   283 .]     4.5      2.6

Alignments of top-scoring domains:
XS: domain 1 of 1, from 146 to 159: score 3.0, E = 8.6
                   *->GWvAraDDYnspgav<-*
                      +Wv  ++DYn+++a+
     W02A2.1   146    PWVT-EEDYNNRTAI    159

FA_desaturase: domain 1 of 1, from 77 to 321: score 239.3, E = 1.6e-68
                   *->awllggtaltglfvtsGLGiTaggHdLcgHrsfsknrwlndlvGhil
                      +++++g+++ +lf+        +gHd cgH+sfs++ wlndl Gh++
     W02A2.1    77    WYWAMGIVGSALFC--------VGHD-CGHGSFSDYEWLNDLCGHLA 114

                   lalllgvpyqgsiieWrrsHrrGHHrytntdekDPdsaprgffavswpks
                   + +++++p+      W+ sHr+ HH+yt ++ekD  +++ +++++
     W02A2.1   115 H-APILAPFWP----WQKSHRQ-HHQYTSHVEKDKGHPWVTEEDY----- 153

                   lsvhyekkvllfshvgwllvlklplyfllaw.plylakgfpGkYdrkkld
                            ++   + + +  ++p +++l w+p+y+ +g p+       +
     W02A2.1   154 ---------NNRTAIEKYFA-VIPISGWLRWnPIYTIVGLPD-------G 186

                   shdlpasplfrfqaaeryyvllsllglfalptllplllwglgglwgvlkf
                   sh++p+s+lf+ ++ +r  + +s++++++ ++++++l  +++++  ++k+
     W02A2.1   187 SHFWPWSRLFETTE-DRVKCAVSGVACAICAYIAFVL--CDYSVYTFVKY 233

                   ylvpylvvgfwlglvnsylaHyggerklPppfappdYdgenskewdwdrg
                   y +p+l+ g  l+++++ l+H  +++    +     Y++   +ew + rg
     W02A2.1   234 YYIPLLFQGLILVIITY-LQHQNEDI----E--V--YEA---DEWGFVRG 271

                   qlsgtvdrdygkllnllfhgegnyHveHHlFP.tiPyynlpeatpaikpt
                   q++ t+dr+ g+ l++++h+++n Hv HH F ++iP+y+l+eatpaik+
     W02A2.1   272 QTQ-TIDRHWGFGLDNIMHNITNGHVAHHFFFtKIPHYHLLEATPAIKKA 320

                   l<-*
                   l
     W02A2.1   321 L    321

DUF113: domain 1 of 1, from 315 to 332: score 4.5, E = 2.6
                   *->EeleeageilKdridqlgvr<-*
                      +++++a+e+lKd   q+g+
     W02A2.1   315    PAIKKALEPLKD--TQYGYK    332

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