hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/Y18D10A.19a
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Query:  Y18D10A.19a  CE21415  locus:fkb-8 FKBP-type peptidyl-prolyl cis-trans isomerases status:Partially_confirmed TR:Q9XW05

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
FKBP         FKBP-type peptidyl-prolyl cis-trans isom   164.9    2.4e-49   2
Peptidase_A4 Peptidase A4 family                          5.2        0.5   1
AKAP95       A-kinase anchoring protein 95 (AKAP95)       3.9        1.4   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
AKAP95         1/1      46    65 ..   292   311 ..     3.9      1.4
FKBP           1/2      94   187 ..     1   111 []    60.9  1.7e-17
Peptidase_A4   1/1     216   224 ..   221   230 .]     5.2      0.5
FKBP           2/2     207   290 .]     1   100 [.   105.3  4.4e-31

Alignments of top-scoring domains:
AKAP95: domain 1 of 1, from 46 to 65: score 3.9, E = 1.4
                   *->FvCSlCKFRtFeeeeiekHL<-*
                      F C lC  RtF  e + kHL
  Y18D10A.19    46    FGCLLCRMRTFNHEGMKKHL    65

FKBP: domain 1 of 2, from 94 to 187: score 60.9, E = 1.7e-17
                   *->GdGpekpkkGDtVevhYtGtLedGgkngkvFDsSydrgkayGaePfe
                      G+G  +p  G+ V +  + +L d         +S++  ++ +  P+
  Y18D10A.19    94    GNGV-MPENGQLVQCYIEIKLAD-------CYTSWSNYESQN--PII 130

                   FtlGqGqVIkGwDegeGvgllgMkvGEkrkltIPpelAYGerGvpgkapi
                   F++G G+VI+G+D  +G  ++ MkvGE++++ +  +++YG +G+ g   i
  Y18D10A.19   131 FKIGFGEVIPGLD--IG--IPKMKVGEIATFHVSGKYGYGRAGFRGL--I 174

                   ppPnaTLvFeVELl<-*
                   p  na L   V L
  Y18D10A.19   175 PR-NASLTCKVRLF    187

Peptidase_A4: domain 1 of 1, from 216 to 224: score 5.2, E = 0.5
                   *->GtTtVTveYV<-*
                      G T VT+ YV
  Y18D10A.19   216    GQT-VTCHYV    224

FKBP: domain 2 of 2, from 207 to 290: score 105.3, E = 4.4e-31
                   *->GdGpekpkkGDtVevhYtGtLedGgkngkvFDsSydrgkayGaePfe
                      Gd  +k+k G+tV++hY+  L+d g+   ++DsS+dr++     Pf+
  Y18D10A.19   207    GDNVTKSKNGQTVTCHYVLILVD-GT---KIDSSRDRET-----PFK 244

                   FtlGqGqVIkGwDegeGvgllgMkvGEkrkltIPpelAYGerGvpgkapi
                   F++G+G+VIkGwD  +G  +++M+v Ek kltI p  ++ e+G+ +
  Y18D10A.19   245 FKIGKGEVIKGWD--QG--VAQMSVKEKSKLTIAPAFGF-EKGKLPA--G 287

                   ppP<-*
                   +p+
  Y18D10A.19   288 IPA    290

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