hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/Y45F10C.3
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Query:  Y45F10C.3  CE16637    status:Partially_confirmed TR:O62474 protein_id:CAB16478.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
FTH            FTH domain                               140.7    2.6e-38   1
F-box          F-box domain                              39.6    7.7e-09   1
carb_anhydrase Eukaryotic-type carbonic anhydrase         5.9        1.3   1
PPTA           Protein prenyltransferase alpha subuni     5.5        7.8   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
F-box            1/1      92   139 ..     1    46 []    39.6  7.7e-09
carb_anhydrase   1/1     341   353 ..   271   283 .]     5.9      1.3
FTH              1/1     213   358 ..     1   153 []   140.7  2.6e-38
PPTA             1/1     380   391 ..    20    31 .]     5.5      7.8

Alignments of top-scoring domains:
F-box: domain 1 of 1, from 92 to 139: score 39.6, E = 7.7e-09
                   *->fslldLPdellleIlsrLdpkdllrlslVSkrwrslvdsl.lwf.kl
                        l++LP+e+++ I s+  p+++l+l++VSk++r+l+ds ++ f+++
   Y45F10C.3    92    IKLDELPIEVINTISSFSMPMERLTLRKVSKNLRTLIDSEpFCFqRI 138

                   l<-*
                   +
   Y45F10C.3   139 I    139

carb_anhydrase: domain 1 of 1, from 341 to 353: score 5.9, E = 1.3
                   *->tQPLkgRvVrASF<-*
                      tQ L +R+V+++F
   Y45F10C.3   341    TQDLHHRTVIKFF    353

FTH: domain 1 of 1, from 213 to 358: score 140.7, E = 2.6e-38
                   *->rekivesleevLkslkkclhVkkislsgfsfsevasILpyFdagtLe
                      +++    l++++ s++  l++kki++sgfsf++  s+L++F+ag+Le
   Y45F10C.3   213    DQELSMVLRKFFDSVEIELYAKKIVVSGFSFADTSSVLCHFKAGFLE 259

                   eIelkssssseiddferiveLeQWKnAKslkiessvvssfpIEhLfHFee
                   eI+      s     + +ve+eQ K+AK lki+  + +  +IE+L+HF++
   Y45F10C.3   260 EIQV--LPGSGGPWTNVLVEMEQYKKAKVLKICTEFPVLLDIEDLLHFRR 307

                   Fdi.tldsfsveDAiKIRDiLlksstFesctiFesdvfefsnsnpieiar
                   F+i   ++f+   A KIRD+L++s +Fe+++i         +++ + + +
   Y45F10C.3   308 FEIaIKSDFTERMARKIRDVLTNSEHFEYAHI------ITQDLHHRTVIK 351

                   vFdPdye<-*
                   +F+ + e
   Y45F10C.3   352 FFNRNAE    358

PPTA: domain 1 of 1, from 380 to 391: score 5.5, E = 7.8
                   *->WnyRrwvleklg<-*
                      +n+R++v++kl+
   Y45F10C.3   380    YNHRQFVIKKLN    391

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