Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/Y59C2A.1
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Query: Y59C2A.1 CE31658 carboxypeptidase status:Confirmed TR:Q9TZC6 protein_id:AAC68743.2
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Zn_carbOpept Zinc carboxypeptidase 241.4 1.3e-68 1
TSC22 TSC-22/dip/bun family 3.6 6 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
TSC22 1/1 85 102 .. 43 60 .] 3.6 6
Zn_carbOpept 1/1 145 350 .. 1 215 [] 241.4 1.3e-68
Alignments of top-scoring domains:
TSC22: domain 1 of 1, from 85 to 102: score 3.6, E = 6
*->nvSpEqLaqlqaqlqlae<-*
+v pE L+++ + l ae
Y59C2A.1 85 LVAPEFLQKFKSLLTSAE 102
Zn_carbOpept: domain 1 of 1, from 145 to 350: score 241.4, E = 1.3e-68
*->ytYhnlqeilawLdsvaseypslvrkesiGkSyeGRelyvLkisadp
+ Yh ++e+++++++++ ++ ++v+ +++ +S eGR++y +ki +p
Y59C2A.1 145 NAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIH-PP 190
gehgpgkPeifldariHarEwvsselmlglleellseygsdariTkLrds
g p+kP+i +da++HarEw+++++ l+ ++++++eyg++++ T +++
Y59C2A.1 191 GPSPPEKPSIIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQK 240
lrfyIvPvlNPDGgEYevtwgsdRmWRKtRsgragSs..cvGtDLNRNwp
+++yI+P +NPDG Ye+++++dR+WRKtRs++ +++ cvG+D NRNw+
Y59C2A.1 241 FDWYIMPQVNPDG--YEYSRTTDRLWRKTRSKNVTVNrwCVGADANRNWG 288
dqWgceggasssPCSEtYrgpaaesePEtkavkdfirsrvlgekgqikvv
+ Wg e ga + PCS++Y g+ + sePE++ k f + + +++
Y59C2A.1 289 YRWG-EAGANRTPCSNIYMGSHPYSEPEIRGLKEFF--T----WQITNPM 331
lyidlHgySqlanlfPYGyt<-*
+yi lH+y ql+ l P+Gyt
Y59C2A.1 332 VYISLHSYGQLL-LSPWGYT 350