hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZC416.6
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  ZC416.6  CE28160   protease status:Partially_confirmed TR:O44183 protein_id:AAB88369.2

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
Peptidase_M1 Peptidase family M1                        304.7   3.7e-105   1
SelA         L-seryl-tRNA selenium transferase            1.9        9.8   1
Peptidase_M8 Leishmanolysin                               1.6        5.3   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
SelA           1/1      56    65 ..   370   379 .]     1.9      9.8
Peptidase_M8   1/1     290   304 ..   258   272 ..     1.6      5.3
Peptidase_M1   1/1      19   392 ..     1   436 []   304.7 3.7e-105

Alignments of top-scoring domains:
SelA: domain 1 of 1, from 56 to 65: score 1.9, E = 9.8
                   *->rlvLDlRtLe<-*
                      +lvLD+R+L+
     ZC416.6    56    KLVLDVRDLS    65

Peptidase_M8: domain 1 of 1, from 290 to 304: score 1.6, E = 5.3
                   *->dqlvtrvVtHEiaHA<-*
                      d ++++v++HEiaH+
     ZC416.6   290    DRSLVSVIAHEIAHS    304

Peptidase_M1: domain 1 of 1, from 19 to 392: score 304.7, E = 3.7e-105
                   *->LPttvkPlhYdLtlkpkfgnlpekpnnftFsGsvtItltnqatkaat
                       +++++++h  ++++++  +  ++     + G++t++    + ++at
     ZC416.6    19    -INEITVEHTAIKWTVS--FQLKM-----IIGQATLRC--RCLTDAT 55

                   deIvLhakdltisstgegvrvtlvlvngsqk.lpesvefslqsetdflav
                     +vL+ +dl i+s      v++++v+++++ +p++ +f+ ++
     ZC416.6    56 -KLVLDVRDLSIRS------VSINGVDCDFRiAPNVYTFFGSKMS----- 93

                   ddnkekltinlpealsagqggpytLkIeyegklndismlGfYrseYtdgk
                        +l  ++ +a++        +++ y ++++  ++l++ + e+t
     ZC416.6    94 ----VYLPPQFQKAGTI-----LQVTVAYGTSPDA-TALQWMKKEQTA-- 131

                   dgetkymatTQfeeptdARraFPCfDEPafKATFtitiihp.kgttalSN
                   d  +++ + ++++++++AR+++PC+D+P++K+T+++ +++p+  t+++S
     ZC416.6   132 D--KRMPYLFSQCQAIHARSIVPCMDTPSVKSTYEAEVTVPtGMTCLMSA 179

                   mpvisttkdddgptrvittFetTpkMStYLlAfiVGeleyietetkdgys
                   + ++ ++ ddd    +++ +++++ +++YL+A++VG le  ++++ d+
     ZC416.6   180 IGQG-SKGDDD---TTTFFYKQPVAIPSYLIAIVVGCLE--KRDISDR-- 221

                   arevpvrvyarpgaknagqgqyalevtkkllefyedyfgipYplpKlDqv
                        + v+a+p++ +   +++++  t  +l+  e+  +++Y ++++D+v
     ZC416.6   222 -----CAVWAEPSVVD--KAHWEFAETEDILASAEEI-AGKYIWGRYDMV 263

                   AvP.dFsaGAMENWGLiTyrepaLLydprsssnsdkqrVaeviaHELAHQ
                   ++P++F++G+MEN+ ++T+ +p+L++++rs+ +        viaHE+AH+
     ZC416.6   264 CLPpSFPFGGMENP-CLTFLTPTLIAGDRSLVS--------VIAHEIAHS 304

                   WFGNLVTmkWWddLWLNEGFAtymEylgtdelggepewnieaqfvlrddv
                   W GNLVT+ +W+++WLNEGF+++ E++++++l +e ++++ a  ++ ++
     ZC416.6   305 WSGNLVTNSSWEHFWLNEGFTMFIERKICGRLVSEDYRQFMAFNGW-TNS 353

                   aqlalasDslgsshPitnklvevntpaeiseiFdsaitYaKG<-*
                            + ++h++t kl + +t+ + +  F+  ++Y+KG
     ZC416.6   354 -LIPAVYEQFTPTHQFT-KLIQDHTNVDPDVAFS-CVPYEKG    392

[DB home][top]