Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/ZC477.2
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Query: ZC477.2 CE05058 serine\/ threonine specific protein phosphatase status:Partially_confirmed TR:Q23345 protein_id:AAK19008.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Metallophos Calcineurin-like phosphoesterase 101.2 2.1e-26 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Metallophos 1/1 57 279 .. 1 124 [] 101.2 2.1e-26
Alignments of top-scoring domains:
Metallophos: domain 1 of 1, from 57 to 279: score 101.2, E = 2.1e-26
*->mrilvigDlHggfedl...............llllela.e.kpdlvl
++++vigD+Hg+f+dl + +++ + +++ + + ++ d ++
ZC477.2 57 APVTVIGDVHGNFHDLyrallarteqditdeQKSNFSTrQfVRDKYV 103
flGDlvdrgppslevllllfalklkapgpvylvrGNHDfdsgnsvy....
flG ++d gp+s+e+++llfa+k+ +p +++l+rG H+++s+ns+ + +
ZC477.2 104 FLGNYIDKGPRSIECICLLFAFKICFPQKYILLRGPHECPSVNSSEflgv 153
............welfleef.lllla.lvdgkillvHgglspd.......
++++++++ ++f+e f++++la +v+ kil+vHgg+sp ++++
ZC477.2 154 metfspnhfkkiHKKFNEAFsWMPLAaVVGQKILCVHGGISPRltswedi 203
..................................................
++ +++ ++ +++ + + + + + + ++++ + + ++ +
ZC477.2 204 rkikrplkdatedplatdllfadtldfdlihiptrkpkyefnvirnmsvm 253
.....leellk.ngvdlvirGHtH.p<-*
++ + +++++ +++l+ir H p
ZC477.2 254 yneaaVTQFCEkFNLKLIIRSHMKvP 279