hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZC506.3
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Query:  ZC506.3  CE01681   phosphatidylserine synthase I status:Partially_confirmed TR:Q09643 protein_id:CAA87373.1

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N
--------   -----------                                  -----    ------- ---
PSS        Phosphatidyl serine synthase                 760.4   7.5e-236   1
PkinA_anch Protein kinase A anchor                        6.5        3.9   1
FtsX       Predicted permease                             5.3          4   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PkinA_anch   1/1      13    29 ..    15    31 .]     6.5      3.9
PSS          1/1     149   426 ..     1   310 []   760.4 7.5e-236
FtsX         1/1     421   463 ..   117   158 .]     5.3        4

Alignments of top-scoring domains:
PkinA_anch: domain 1 of 1, from 13 to 29: score 6.5, E = 3.9
                   *->tpRKksrsdkeqkpeea<-*
                      tpRK++ ++  + pee
     ZC506.3    13    TPRKRKNRSNNEQPEEM    29

PSS: domain 1 of 1, from 149 to 426: score 760.4, E = 7.5e-236
                   *->PHPAlWRivFGvSVvYllfLqFlLFQtfdDirqflkWLDPkLggave
                      PHP++WRivFGvSVvYl++LqF+LFQt++Di+++l+WLDPk++g+++
     ZC506.3   149    PHPVFWRIVFGVSVVYLMLLQFTLFQTYTDIKTVLTWLDPKGLGNED 195

                   LpEkmEYgvNCsiispdrkTdrFkNLiwshlDiFafAHFtGWamKALLIR
                   L+Ek EY++NCs++s++r        +wsh+DiFa++HFtGWamKALLIR
     ZC506.3   196 LVEK-EYAINCSDVSLER--------LWSHMDIFAVGHFTGWAMKALLIR 236

                   hwvLCWvISImWEltEltFeHLLPNFaECWWDsiILDVLiCNGlGIwaGM
                   h+vLCW+ISI+WEltE++F++LLPNFaECWWD+iILDVLiCNGlGI+aG+
     ZC506.3   237 HGVLCWYISIAWELTEIVFTQLLPNFAECWWDAIILDVLICNGLGIFAGL 286

                   kicrfLemRtYhWeSIknIpTtrGKiKRavlQFTPaSWskfeWkdskSPa
                   +ic++L+mR++hWeSIk+I+T+rG++KR+v+QFTP+SW++f+W+   S++
     ZC506.3   287 QICKWLSMRNFHWESIKHIKTNRGRFKRMVMQFTPESWNDFDWG---SFT 333

                   sslkRfaaVyllviiWLPPPikRLnFknCDtAHFFqLtELNTFFLKHvfw
                   +++kR+++Vy++v+iWL                   LtELNTFF+KHvf+
     ZC506.3   334 VTIKRTMSVYVFVLIWL-------------------LTELNTFFMKHVFS 364

                   ippkHPvVlwRLIlialIaAPtvRqyYvYltDlkpcKRVGtQCWVflaIc
                   +++kHPvV+wRLIlia+I+AP++Rq+Y+Y+tD +++KR+G+QCWV+la+c
     ZC506.3   365 VDTKHPVVFWRLILIAFISAPSIRQFYLYATD-PLIKRLGMQCWVYLAVC 413

                   vlEllICvKfGsh<-*
                   +lE++ICvKfG+h
     ZC506.3   414 ALEAAICVKFGIH    426

FtsX: domain 1 of 1, from 421 to 463: score 5.3, E = 4
                   *->vyfidalplslsp.vvllalllalligllagllParrAarldP<-*
                      v+f +     + ++ +++ +l+ ++ ++++ ++  ++A r ++
     ZC506.3   421    VKFGIHMFPRVAItPIVIWILFLIVGTFFSVWFSVWWAKRSSA    463

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