hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZK1127.2
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Query:  ZK1127.2  CE07642   COA ligase status:Partially_confirmed TR:Q23404 protein_id:AAB93427.1

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
AMP-binding  AMP-binding enzyme                         312.3    5.9e-90   1
G3P_antiterm Glycerol-3-phosphate responsive antiterm     9.1       0.25   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
G3P_antiterm   1/1      37    51 ..   176   192 .]     9.1     0.25
AMP-binding    1/1      57   472 ..     9   373 .]   312.3  5.9e-90

Alignments of top-scoring domains:
G3P_antiterm: domain 1 of 1, from 37 to 51: score 9.1, E = 0.25
                   *->CFiEREETSnkSCeLWk<-*
                      CFi+ E T++k  +L k
    ZK1127.2    37    CFIDAETTTKK--KLYK    51

AMP-binding: domain 1 of 1, from 57 to 472: score 312.3, E = 5.9e-90
                   *->anrlAaaLralGvgpGdrVaillpnspelvvailAvlkaGaayvPld
                      +n lA aL++lG +pGd+   + pn+pe++va+lAv+k G+a +
    ZK1127.2    57    VNSLATALVKLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGAMSNAS 103

                   psypaerlayiledsgakllltddallarl....................
                   + +++ +l+ ++ ds+ ++++td++ lar+  ++++ +++ +     + +
    ZK1127.2   104 AIFTDYELQLQFCDSNTSIVFTDEDRLARIrratakcpgvrkiiclrtfp 153

                   ..................s.e.p.ppvdpddlAyiiYTSGTTGkPKGVml
                     ++ ++ + + ++ + +++++ ++ v+ d++A++ Y+SGTTG+PKG++l
    ZK1127.2   154 lrtefpenvldyveltqtPdQpInVNVSMDSIALLPYSSGTTGRPKGCQL 203

                   tHrnlvnlvaala.rf.l.pdd.a..........ervlllapplyhfdgs
                   tHrn+ ++++ +  +++ +  + + ++++ + ++e++ ll+p    ++ +
    ZK1127.2   204 THRNIGAMLDVAKaHLeTdVAPaMfgkekatwhkEHTVLLLP--WYHAYG 251

                   vwelfgpLlaGatlvlvpkftryrdp.alldliekykvTvlflvPtllrl
                   +  +f ++l+G+t +++ kf+       +l  i+ ykv  ++lvP++l
    ZK1127.2   252 LNTMFETILLGMTGIVFKKFD----TiVMLNRIKFYKVKLAWLVPPMLIF 297

                   llaape.....dlssLrlvlsgGealppellrrlrerfgsggvrlvngYG
                   l+++p  +  +  + L++++s+G+   ++l++++ +rf+  ++ l ++YG
    ZK1127.2   298 LAKDPMvpifnTAPFLKVIMSAGATAGKQLCEEVSKRFP--NAWLCQAYG 345

                   pTEttvvatanppg.d..pgsiGrPlpgvevyvlDeeg.rpvppGevGEL
                   +TE   ++t+ + ++++   ++G   + +e+++lD e +++  ++ vG L
    ZK1127.2   346 MTEMVQFTTIPRFEdGncFETVGNLASTYELKILDKEKkEITTINTVGQL 395

                   yirGwpgvarGYlnrPelTaerFvadgwgRmYrTGDlarwdpDGyleilG
                   + rG p v++GYl+r+e  a+ +++dg+   + TGDl+ +d+ G ++++G
    ZK1127.2   396 CFRG-PTVMKGYLKREE--ADIIDKDGF---LLTGDLGSIDDKGRIHVTG 439

                   RiDdqvKirGerIepgEiEavLlehPgVaeAaV<-*
                   Ri++++K++G ++ p EiE+vLl hP+V+++aV
    ZK1127.2   440 RIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAV    472

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