Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/ZK177.8a
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Query: ZK177.8a CE07618 status:Partially_confirmed SW:Q09374 protein_id:AAG00049.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HD HD domain 39.3 5.5e-09 1
DUF86 Protein of unknown function DUF86 11.4 0.08 1
CHB_HEX Putative carbohydrate binding domain 7.2 0.83 1
PLA2_inh Phospholipase A2 inhibitor 3.4 7 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
HD 1/1 92 146 .. 1 62 [. 39.3 5.5e-09
CHB_HEX 1/1 189 221 .. 1 33 [. 7.2 0.83
PLA2_inh 1/1 408 425 .. 74 91 .. 3.4 7
DUF86 1/1 531 553 .. 1 23 [. 11.4 0.08
Alignments of top-scoring domains:
HD: domain 1 of 1, from 92 to 146: score 39.3, E = 5.5e-09
*->vleHslrVallaaelaeelglskhp.g.eesiavlegkeldpellll
++ Hsl++ la l ++l +s++ + + e d+ ++ +
ZK177.8a 92 RFVHSLGTFSLAYALVDKLRHSQPSlNiT---------ESDLICTSV 129
AALLHDiGkdlfgdsfl<-*
AALLHD+G+++f++ f+
ZK177.8a 130 AALLHDVGHGPFSHLFD 146
CHB_HEX: domain 1 of 1, from 189 to 221: score 7.2, E = 0.83
*->dNLalnyklldnlaAekpldCpkmgtfnGLead<-*
a++++l++ l+ kp+d+++m+ f L ad
ZK177.8a 189 EEYAKSVTLITELISGKPFDFQDMDGFKDLPAD 221
PLA2_inh: domain 1 of 1, from 408 to 425: score 3.4, E = 7
*->CkLeyfdvnighelylrg<-*
CkL+yf++n+ + + l+g
ZK177.8a 408 CKLGYFEMNPENATQLKG 425
DUF86: domain 1 of 1, from 531 to 553: score 11.4, E = 0.08
*->eefvknkllrdAvkrnlevagEa<-*
+ ++k +ll d+vkr l++agE+
ZK177.8a 531 RSLRKEPLLADRVKRALQLAGES 553