hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZK270.1
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Query:  ZK270.1  CE15305  locus:ptr-23  status:Partially_confirmed TR:O02246 protein_id:CAB04167.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Patched  Patched family                                1639.5          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Patched    1/1      64   957 ..     1   957 []  1639.5        0

Alignments of top-scoring domains:
Patched: domain 1 of 1, from 64 to 957: score 1639.5, E = 0
                   *->vlsskilytftpsDirksytergvrsedeplverkFfpgdgkpiarf
                      ++++kil+t++++Di+ +yt++g+r++de+l+++kFf+++g pia++
     ZK270.1    64    LAIVKILLTKQANDIT-GYTPYGARAKDEYLEYQKFFSSSGLPIAAY 109

                   viitakarnsedytrpNiLdikyLnevvqvndfiltnvtipvsgalkkit
                   ++i+ak++ s       +++++yL+e++qv++f+l+n+t+++s++  +++
     ZK270.1   110 LYIVAKDEGS-------MSRPDYLDETIQVLNFALNNITMYDSIS--GKS 150

                   lsfkdlCssfcdincpvnqhyngLdtlailrsnlhnsridltYPtmtffg
                   ++f+++C+sfc+in+pv+q+yng   ++il+++++nsri+++YP++++fg
     ZK270.1   151 ETFNQFCQSFCQINEPVRQFYNG---YQILSDGEQNSRIKIQYPVSDMFG 197

                   tkiylgpnfgGVkldpgeNdvekllDs........ltklklvdtkseegn
                   ++++l+pnf+GV+l+++++d++kllDs ++++  +l+++klvd++s+++n
     ZK270.1   198 RQFSLQPNFFGVELFDQPDDAAKLLDSadgdpvieLNATKLVDPVSRITN 247

                   iksvkaivLyyrlkrdpeeveedskeWElsledyleneyksdshievtif
                   +ksvk+i+L++r++++p+++e+++k+WE+sl+d++e++y+s+ +++++++
     ZK270.1   248 VKSVKMITLQFRAEHKPGWTEAQVKKWEMSLVDIFEKRYNSK-RLKIYAY 296

                   sdqvledElvrngltlvPffvvgFaiLvtFsvltsvvlavrrsgslhidw
                   s++++e+E+vr+g++++P++vvgFai++++s++ ++++a      +++++
     ZK270.1   297 SQSYVEEEMVRGGIIMIPYLVVGFAIMCLCSCVLVMIRAL-----YMHQE 341

                   vssKpiLAilgvltPlmAivsAfGlLfwlGfrFnsIlcVmPFLVLGAIGV
                   + +K+iLAi+++ltPl+A+++A++l+f++G+rF+sIlcV+PFLVL +IGV
     ZK270.1   342 NGYKIILAIMACLTPLLACATALALMFLCGVRFASILCVIPFLVL-SIGV 390

                   DDmFLMvhaWqrttrslssrarK..vvkkRmgevlvEaGPSItITSlTnv
                   D+++LM+h+Wqr+t+++++++rK+++v++Rm+ev++E+GP+I+I++lTn+
     ZK270.1   391 DSSYLMIHEWQRVTKHMRETPRKkdSVGHRMSEVMAEVGPAILISCLTNM 440

                   LSFgIGaiTptPeIqlFCiytavAiffdfiYQlTFFaAilaiagkyEmkg
                   +++++G +T+ PeI+l C++++++++f+fiYQ+TF+a++++i+g yE+ +
     ZK270.1   441 FADAVGSFTSSPEITLLCTGNMLSMWFAFIYQMTFYAGLMSIVGGYEFGS 490

                   rhslflriTakavdaaetespkklkkqrlksrgsakaaPvekegeknSkf
                   ++++++r   +++++ae++++    ++r++++++++
     ZK270.1   491 DEIDKNR---MEINIAENRVN----IARHHRPLTRQ-------------- 519

                   seveesleseksssdssksheaeqktavvkfflniYcpfllnpkvrvcvl
                                  +sk+hea+q  +++++ l++Y++++++p v+v v+
     ZK270.1   520 ---------------PSKFHEATQ--PIISDSLQKYTHLMTTPLVFVSVC 552

                   lvyvvYlaiaiYGctnlkegLdPskLllkDSpLveilrlrekhvwpyGsq
                   lvy+ Yla+++YG+t+l+++L+++kL++ DSpL+e ++lr+k+++p++s+
     ZK270.1   553 LVYIAYLAFSVYGITQLNINLTAQKLFALDSPLLELDDLRIKYQVPVYSM 602

                   vtVvVNNPPDLtnpenrdrllemvdeFEntpyalGk.W.EnsTkfWLrdY
                   +tV+VN+P++L+np++++rl+e+v+e+E++++++G++W+E +Tk+++rdY
     ZK270.1   603 ATVFVNTPGKLENPARLKRLNEFVREMESINGTWGEgWgELGTKYFVRDY 652

                   ekFlsssEeinleaseledeeeeidevdpvsvvvkdkqewifydllewFl
                   ++F++s      ++se+ed+e+++d+++pv+v+++dk+++ ++d+l++Fl
     ZK270.1   653 DVFQQS------FGSEDEDDEDFMDDDKPVTVHSDDKMTY-REDELKYFL 695

                   kspgfshWqgdlvwdn...ktdketteikkFrFttgyHgkdlstwtdRtk
                   k+p++++Wqg+++ +n +++td+e++e+++F+FttgyHg++l++wt+R++
     ZK270.1   696 KWPEYDFWQGFVKLRNatnSTDPEAEELDRFFFTTGYHGDNLTIWTQRGE 745

                   llkewRgvAdeypddFNVTVFdedafFlDqilsilpttiQsiiwtlicMa
                   +l++wR+v+d+ypd F+++VF+ed+++lD+i++++++t+Qsi+ tl+cMa
     ZK270.1   746 MLRAWRQVVDKYPD-FGASVFHEDGVYLDLIDNMPTDTWQSILGTLVCMA 794

                   vVCflFIpnpitvfvitvsiaSIdiGVfGfLSLWGVdLDPisMitiIMSI
                   +VCf+F++n++tv+++++s++SI++G++GfLS+W+VdLDPi+M+++I+SI
     ZK270.1   795 MVCFVFLNNWFTVAIASLSVLSICAGILGFLSWWKVDLDPITMAAMIISI 844

                   GFSVDfsAHiaYhFyrskgsesrsikkiplktpdeRvadALealGWPviQ
                   GFSVD++AH++Yh+y+++++e+++      ++p++R+a++L+++++P +Q
     ZK270.1   845 GFSVDIPAHVSYHYYQASIQEGPM------SPPSSRLANCLSSVAFPALQ 888

                   AalSTiLcvlvLlFVpsYmvvvFfKTifLVVvlGlLHGLifLPilLslfv
                   AalSTiLcv++LlFV++Ym++vF+KT++L+Vvl++LHGL+fLP++L+l++
     ZK270.1   889 AALSTILCVCSLLFVNLYMAEVFVKTMVLCVVLCNLHGLVFLPAILILLD 938

                   tssrifggdviirtsnakikkpseq<-*
                   + +r     +++r++ a++++p+++
     ZK270.1   939 S-IR-----WACRPKGAAAQRPKQP    957

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