Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/ZK430.8
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Query: ZK430.8 CE05084 peroxidase status:Partially_confirmed TR:Q23490 protein_id:AAA83575.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
An_peroxidase Animal haem peroxidase 947.2 4.5e-281 1
ShTK ShTK domain 50.9 9.2e-14 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
ShTK 1/1 41 77 .. 1 44 [] 50.9 9.2e-14
An_peroxidase 1/1 190 693 .. 1 596 [] 947.2 4.5e-281
Alignments of top-scoring domains:
ShTK: domain 1 of 1, from 41 to 77: score 50.9, E = 9.2e-14
*->tCvDyvDpasdCaawaslGefCnnppYyqdfmkenCpkTCGfCs<-*
+C D++ +C++was+Ge Cn ++ d+m+enC+ +CG+C+
ZK430.8 41 GCC---DHHEWCRFWASIGE-CNANK---DWMTENCQLACGTCT 77
An_peroxidase: domain 1 of 1, from 190 to 693: score 947.2, E = 4.5e-281
*->rYRtlDGtCNNlenPtwGaanspfrRllpPsYdDGidaPRsrsvdgs
+YRtlDGtCNNle+P++Gaa+++f+R++p++YdDG ++P+s s ++
ZK430.8 190 MYRTLDGTCNNLEKPMQGAAFRRFNRHFPAQYDDGKGEPIS-S-LNQ 234
pLPsaRvvSrkllsdrdfpipdpkfgtTlmvmqfGQFmaHDitktsssts
++PsaR++ r++ls+++++ ++ kf ++m+mq+GQFm+HD++kt+ ++s
ZK430.8 235 SRPSAREANRVMLSSAQSV-VHDKF--NNMMMQWGQFMSHDMSKTTLQPS 281
PiEengealeCckcdspvspqlshpeCfPIpvppdDPffgqlgvrClpFv
n C++cd ++ ++C+PIp+ ++DP++g+ +++Cl++
ZK430.8 282 ---AN-----CKTCD------PVPSKCMPIPIGEKDPNLGFKSKQCLKVS 317
RSlpaprtgpqcrlGgpReQlNqaTayiDaSpiYGssaeearklRaFqgG
RS+p+ cr pReQlN++TayiD+S+iYGss+++++k+R+++ G
ZK430.8 318 RSAPI------CRV-EPREQLNENTAYIDGSMIYGSSLKDLHKFRDGRTG 360
lLktspdnggpvrlgrdllPldentqdcgsCvyprsaagsgCfiaGDdRv
+L+++++n + ++ lP+d++ +c+ ++++++++f+aGD+R+
ZK430.8 361 FLRVTRFN-N-----QNVLPFDQS--KCA-----NKDKCTASFTAGDIRA 397
nlqpgLaaLHtLflREHNRiAdaLkalNPhWdDErlFQEARkIviAqmQh
nl++gL++LH++f+REHNRiA++L +lNP+W+ +r+FQEARkIv+Aq+Q+
ZK430.8 398 NLFIGLSSLHIMFAREHNRIAQKLTELNPTWSGDRVFQEARKIVGAQIQN 447
ItynEyLPilLGrelmkkMrANWyGLLGfgLvygplksGyVgyyngYdpn
+ y EyLP+lLG+++ k +g +y+gYd+n
ZK430.8 448 VLYKEYLPKLLGVSFDKV----------IG------------PYKGYDTN 475
vQYnpsianEFatAAFRfGHslipgkfplvdendkiyfgkpisnlsgsvr
v +++ianEF+t+AFRfGH++i++++++vd + g++i+ g++
ZK430.8 476 V--DATIANEFTTSAFRFGHGMIEEFYKRVDLS-----GNNITH--GGFF 516
LsdlffnpselylilaeggvdqllrGlatqpaGrmLnrvDrfitdevtnk
++d++f++++ il+eggvd+++rG++t+++ ++++++t+++t+k
ZK430.8 517 FGDGVFKSGK---ILFEGGVDPIIRGFMTTAV-----KRPHRMTPAITEK 558
LFgtrgeppfglDLasinIqRGRDhGlpsYNeyRefCGLpratsFeDLtd
+Fg + DL+s+nIqRGRDhG+psYN++R+fCGL+ a++F+D++d
ZK430.8 559 MFG-------STDLGSLNIQRGRDHGIPSYNKMRQFCGLKSANTFDDFAD 601
lispdeenlarLkslYendvdDvDLyVGgllEkpvpGglvGpTfaCIiae
+i + ++++a L++ Y+ + DvD+yVG++lE+pv GglvG+T++C i+e
ZK430.8 602 MILD-RNLRAGLARNYN-TTNDVDFYVGSMLEDPVIGGLVGTTLSCAIGE 649
QFqRlrrGDRFwYEngrgkpsgFTpeVQLaeiRKtsLarliCdNtdvlt<
QF+R r+GDRF++En p++FT++ Q++ei+K+sL+r+iCdN+d+++
ZK430.8 650 QFKRARDGDRFYFEN----PGIFTRS-QMEEIKKSSLSRIICDNADNFE 693
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ZK430.8 - -