hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5a/seq/ZK550.3
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Query:  ZK550.3  CE16734    status:Partially_confirmed TR:O62512 protein_id:CAB05313.1

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N
--------      -----------                               -----    ------- ---
Peptidase_M3  Peptidase family M3                       550.5   7.7e-173   1
Peptidase_C13 Peptidase C13 family                        4.7        1.5   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Peptidase_C13   1/1     176   194 ..   175   193 ..     4.7      1.5
Peptidase_M3    1/1     298   804 ..     1   512 []   550.5 7.7e-173

Alignments of top-scoring domains:
Peptidase_C13: domain 1 of 1, from 176 to 194: score 4.7, E = 1.5
                   *->eelyakDLadtlkkmhask<-*
                      e l++kD+ d++k++++ k
     ZK550.3   176    EKLTNKDFQDAIKQLYEAK    194

Peptidase_M3: domain 1 of 1, from 298 to 804: score 550.5, E = 7.7e-173
                   *->llkespdrelRkeayrAfysraeqyrntlgsneNsalLeellklRae
                      +++++ dr+lR +a++++ s+a++++   ++++Ns  +eel+++++
     ZK550.3   298    FMQYCGDRQLRATAWEKWTSKAGFDH---DFYNNSINIEELRHNNEG 341

                   llfnAkllgypsyaeaaLedkMakiPetVydFLeelvnklrPllerelal
                   l   Ak+lgy+s ae++L++kMa +PetV+ F+++l+++ rP++ +++++
     ZK550.3   342 L---AKTLGYSSVAEHRLANKMAASPETVRGFINALQRRIRPVVIDRMES 388

                   lkkmkkkelkkplGlefdpelqpWDvaYYsekqreelydP......s.fS
                   +++++ +++       +++elq++D++Y+++k+ e++y++  + ++s+fS
     ZK550.3   389 WSAWAGRCEL------ITGELQAYDMPYVCRKEAEHHYEFffqlksSnFS 432

                   .l.ldqeelrpyFpleqvleGLfelferLfGitfveekdapgkkalktLa
                    +++++ +l+++Fp++ +++++++++ ++f+++f++++d+++
     ZK550.3   433 fFrVNPLDLMNHFPFWPTFQNIMGVIGHIFNLEFKDITDKGL-------- 474

                   pLGevwheDVrfyeVfDeilsggllgefYlDlyeRkgKrgGw........
                      e  h+DVr+y+V D+ +sg+++g  Y+D+y R++KrgGw+    ++
     ZK550.3   475 ---EKAHADVRIYSVGDK-FSGQHYGRLYIDPYDRQNKRGGWnvmlarhy 520

                   .AysfglvggrplsrkddkdGs.qlpvpyllcNftkq............P
                    A++++++++++ls    k+++++++v   lc+ + q+  + ++++  ++
     ZK550.3   521 lAFFSNYFCKKILS----KNRNpKNEVSTRLCTSSAQqllqlptdrlfsI 566

                   ss.....gkPsLLtlddVeTLFH..EfGHsmHsllsrteysyvsgt....
                   +s+ ++ +++s++++  ++  F++ +fG s++ lls+++y ++s + ++
     ZK550.3   567 TSsfsnfFSMSVVEILGLNLNFRnfQFGRSVQLLLSQSPYRDISIPwspf 616

                   tnvpiDfaElPSqfmEnwlweplllallarphyetgepipeellekliks
                   + + +D+a+++ +f+++++++p+lla++++ph+ t+++++ee+ +++ ++
     ZK550.3   617 YASDWDAADMFPTFLQMFVTKPNLLATISSPHQITKQSLTEEHANSVALT 666

                   knvnaalftfrQlmfAaFDqelHeaaeedqpltdedltdveyaeLqkkyy
                   +++++ ++t+r l++++FD++++e+++++q    ++++d +y++++++y+
     ZK550.3   667 ISRASLWETYRTLFWSDFDLSIYEMEDRKQ----KFWLD-MYKQMYEEYF 711

                   gflpvvpldtawpleWarsFgHlfaiGPHgYaAnYYsYlyAevliAAldi
                   + ++ ++ ++++p+    sF+++fa++   ++++YY  l+Ae+l  Aldi
     ZK550.3   712 P-FKRAK-NDYQPC----SFTPIFALQ--PHMSMYYRKLWAEML--ALDI 751

                   fekffeqglneealretGeryykeiLsrGGSldplellkkfggrepsada
                   +e+f e++ ne    +tGer++++iL+rG+++ ++el+k+f+gr+ps+ a
     ZK550.3   752 HETFDEED-NE---VQTGERLKTTILNRGSGDVAKELFKRFQGRNPSVGA 797

                   llralgl<-*
                   ++++++
     ZK550.3   798 ICDHYAP    804

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