hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5a/seq/ZK593.1
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Query:  ZK593.1  CE24731   pyruvate kinase status:Confirmed TR:Q23539 protein_id:CAA93424.2

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
PK        Pyruvate kinase, barrel domain                745.7     2e-220   1
PK_C      Pyruvate kinase, alpha/beta domain            173.5    3.4e-48   1
HpcH_HpaI HpcH/HpaI aldolase family                       9.0        0.2   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
HpcH_HpaI   1/1     247   269 ..   155   177 ..     9.0      0.2
PK          1/1      30   379 ..     1   364 []   745.7   2e-220
PK_C        1/1     393   513 ..     1   137 []   173.5  3.4e-48

Alignments of top-scoring domains:
HpcH_HpaI: domain 1 of 1, from 247 to 269: score 9.0, E = 0.2
                   *->dqvcilvQiESaegvkNvdeIaA<-*
                      +++ i++ iES++gv+N deI++
     ZK593.1   247    KHIYIIAKIESEDGVTNCDEIIE    269

PK: domain 1 of 1, from 30 to 379: score 745.7, E = 2e-220
                   *->srrlRrTkIVcTiGPasnsvEnLekLikAGmNVaRmNFSHGsHEyHq
                      + + R+T  +cTiGPa  +vE+L k+i  GmN+aR+NFSHG+HE H+
     ZK593.1    30    PQKTRKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAHA 76

                   eridnVReaekktgglPlYRPVAIaLDTKGPEIRTglfkdGadkeielke
                   ++i+++Rea+++++      PVAIaLDTKGPEIRTg f++   ke++l
     ZK593.1    77 ATIKTIREAAENAPF-----PVAIALDTKGPEIRTGMFANNM-KEVQLEN 120

                   GdkmlvstdeaykeacdkekiyvDYknlvkdVsvGgtIlvDDGvlsLkVl
                   G  ++vstd+  + a +   iy DY nl+k+V++G++I++DDG++sL V
     ZK593.1   121 GKSVRVSTDPSMEFAATSSHIYADYRNLPKVVQPGSRIYIDDGLISLIVE 170

                   ekdddkrtlvveveNgGvLgsrKGVNlPGtdVdLPALsEKDkaDLrFGVk
                   ++++ +  + ++ eNgG Lg rKGVNlPGt VdLPA++ KD++DL FGV+
     ZK593.1   171 SCEETA--VICTIENGGALGTRKGVNLPGTIVDLPAVTSKDIEDLLFGVE 218

                   qPgGVDmiFaSFvRkAsDVlevRevLgekGakdIkIiaKIENqeGVnNde
                   q g VD+iFaSF+R A  ++ +R vLgekG k+I IiaKIE++ GV N
     ZK593.1   219 Q-G-VDIIFASFIRNADGIHKIRQVLGEKG-KHIYIIAKIESEDGVTN-- 263

                   AfDEILeasDGiMVARGDLGiEIPaekVflaQKmlIaKCNlaGKPVItAT
                     DEI+easDG+MVARGDLGiEIPaekVflaQKmlIaKCNlaGKPVI+AT
     ZK593.1   264 -CDEIIEASDGVMVARGDLGIEIPAEKVFLAQKMLIAKCNLAGKPVICAT 312

                   QMLESMikNPRPTRAEvSDVANAVLDGtDCVMLSGETAkGnYPvEaVktM
                   QMLESMi++PRPTRAE SDVANAVLDG DCVMLSGETAkG+YPvEa ++M
     ZK593.1   313 QMLESMITKPRPTRAECSDVANAVLDGVDCVMLSGETAKGDYPVEALAIM 362

                   heicleAEkaldhrvlf<-*
                   h ic+eAE+a +h ++f
     ZK593.1   363 HNICKEAESAFFHMKHF    379

PK_C: domain 1 of 1, from 393 to 513: score 173.5, E = 3.4e-48
                   *->tEaiAmSAVrAAfelkGAkAIiVLTtSGrTArLvSKYRPnaPIiaVT
                      t ++A++AV+A   ++ A AIi  Tt+G+TArL+S+YRP +PIi V+
     ZK593.1   393    THTTAIAAVSATITCR-AVAIILITTTGKTARLCSRYRPPVPIITVS 438

                   rPVLTTDFDWIneqtaRqshLyRGVfPvlyeekkPdsnkaiwaedvderl
                   r          +e+++Rq+hL RG+fPv+y+         +w+ dv+er+
     ZK593.1   439 R----------DERISRQLHLHRGIFPVYYP----KGRIDEWDVDVEERV 474

                   klAvdsAkerGllkkGDlVvvVqGwrgGesGsTNtmRvvt<-*
                   + +v+ +k+rG++  GD  +v++Gw+ G +G+TNtmR+v+
     ZK593.1   475 QYGVNLGKTRGFIHLGDPLIVITGWKQG-AGFTNTMRIVV    513

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