Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5a/seq/ZK6.7a
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Query: ZK6.7a CE18444 lipase status:Confirmed TR:O61866 protein_id:AAG45574.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
abhydro_lipase ab-hydrolase associated lipase region 169.5 4.7e-47 1
abhydrolase alpha/beta hydrolase fold 32.7 4.7e-09 1
ATP-synt_8 ATP synthase protein 8 4.8 1.7 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
abhydro_lipase 1/1 21 92 .. 1 71 [] 169.5 4.7e-47
ATP-synt_8 1/1 123 138 .. 41 56 .] 4.8 1.7
abhydrolase 1/1 106 174 .. 1 57 [. 32.7 4.7e-09
Alignments of top-scoring domains:
abhydro_lipase: domain 1 of 1, from 21 to 92: score 169.5, E = 4.7e-47
*->idpeanmnvsqlIkkwGYpsEeHtVtTeDGYILtLhRIprgkknktd
+dpe++m+++q+I++wGYp++++tV+T+DGYIL++hRIp+gk+n+t+
ZK6.7a 21 GDPELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTW 67
.lgkrPvVlLQHGLlasSsnWVvNl<-*
++gkrPvV++QHGLl++Ss+WVvNl
ZK6.7a 68 pNGKRPVVFMQHGLLCASSDWVVNL 92
ATP-synt_8: domain 1 of 1, from 123 to 138: score 4.8, E = 1.7
*->ktklkkkpnpWnWkWT<-*
k+ +++++ +W+W W
ZK6.7a 123 KDLKPSHSAFWDWSWD 138
abhydrolase: domain 1 of 1, from 106 to 174: score 32.7, E = 4.7e-09
*->frvillDlrGfGeSsp.............sdlaeyrfddlaedleal
f+v+l+++rG +S ++++ +++++ + ++e + dl ++++ +
ZK6.7a 106 FDVWLGNMRGNTYSMKhkdlkpshsafwdWSWDEMATYDLNAMINHV 152
ldalglekpvilvGhSmGGaial<-*
l+ +g++ v++ GhS+G+++++
ZK6.7a 153 LEVTGQDS-VYYMGHSQGTLTMF 174